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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
KL.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.507NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.54NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.196NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.57NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.34NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.459NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.117NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.381NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.237NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.382NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.395NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.61NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.40NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.153NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.62NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.391NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.448NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Q.1 (Alpha)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.46 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.99 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.243NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
R.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.216NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.471NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.16NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.420NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
L.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.518NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.551NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.207NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.604NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.111NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.619NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.36.3.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.36.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.23.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.316NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AZ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.436NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.558NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.518NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.368NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used