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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.110.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.342NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.500NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.511NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.428.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.506NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.482NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.335NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.499.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.116NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.134NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.393NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.381NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.32NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.516NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.526NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.279NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.133NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.466NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.489NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.363NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.95NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.26NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.531NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.45NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.200NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.299NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.55NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.149NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.300NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.179NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
C.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.125NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
G.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.438NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.35NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.178NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.208NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.197NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.491NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.8 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.39.3 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.8.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.190NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.552NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used