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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
BF.7.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.214NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.284NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.351.3 (Beta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.318NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.29 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
ML.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.283NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.96NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
L.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.22NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.38NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.38.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BT.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.55NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.76NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.30NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BE.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.31NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.4.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.6.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.41NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BS.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BM.1.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.5.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.513NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.338NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.284NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.9.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.498NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.184NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.187NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
D.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used