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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.4.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.181NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.6.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.36NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.407NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.20NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.281NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.230NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.535NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.564.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.345NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.53NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.450NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.334NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.589NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.335NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.169NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.42NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.442NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.75NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.51NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.106NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
D.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.593NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.438.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.3.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.25NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.4.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.47NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
ED.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BN.1.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CQ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CH.1.1.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.38.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.7.19.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.43NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.2.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used