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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XAENWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.467NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.484NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.476NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.19NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.404NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
CV.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DJ.1.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BQ.1.1.73NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DW.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BR.5.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.75.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAKNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.290NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.341NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.161NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.69 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.46NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.139NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.508NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.94NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.463NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.357NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.318NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.557NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.119NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.160NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
D.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.447NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.110.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.180NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.155NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.92NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.145NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.120NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.77NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.504NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AE.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.201NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.221NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.410NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.411NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.51NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XATNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.24NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.11NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used