Browse
Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
XBB.1.5.66NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GS.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.258.17NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.21.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.1.37NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EE.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
ES.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.41NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.19.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.479NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.437NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.371NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.4.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HU.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EG.1.4.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KJ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JC.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.625NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HD.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.42.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.348NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.459NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.160.29NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.415.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.243.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.98NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.566NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.480NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.579NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
N.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
P.1.11 (Gamma)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.435NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.445NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.124NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.384NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAQNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.3.8NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.569NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
A.23NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.596.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.473NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.595.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.76.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.38.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used