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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
B.1.1.402NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.424NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.61NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.264NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.330NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.205NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.177NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.301NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.308NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.210NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.325NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.590NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.116NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.496NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.438.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.49 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HH.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
KN.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.43.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.332NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JB.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.86.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JW.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.3.18NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBC.1.6.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.39NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.141NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.591NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.468NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.131 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.586NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.366NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.380NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.148NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.382NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.356NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.376NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.607NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.163NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.337NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.158NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.602NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.289NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
DV.7.1.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XDHNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.48NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.10NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EK.2.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.1.5.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used