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Prediction results retrieved after performance evaluation of WHO approved 34 primers to estimate their binding affinities for 3892 SARS-CoV-2 variants.

Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used
  
AY.98.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.13.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
HK.34.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.124.1.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.203NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.8.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GY.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.7.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.254NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.36.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.36.12NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.122.2 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AQ.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.1.1.7NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.209NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.236NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.2.33NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XQNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.177.59NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.395NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.120.2.1 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.532NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.408NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XHNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FZ.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.4NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.497NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
EN.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.30 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.85 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.6.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.21NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FK.1.3.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBFNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BA.5.6NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
BF.11.5NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBF.7.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FY.5.3NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FP.2.1.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XBB.2.9NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
FL.2.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JW.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
JL.1NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.571NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
AY.55 (Delta)NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
XAMNWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.1.239NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
B.1.574NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
GA.7.2NWon-NGTTGCGACTACGTGATGAGG20552884928830R-23088.1South Korea
Lineage
(WHO label)
  
Target Gene
  
Primer Name
  
Primer Sequence
  
Primer Length
  
Primer GC Content (%)
  
Start Position
  
End Position
  
Primer Direction
  
ΔG (cal)
  
Primer first used